PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_15554-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 381aa    MW: 40772.1 Da    PI: 9.7061
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_15554-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_162.21e-19300362163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+e+k+++rkq+NRe+ArrsR+RK+ae ee + +++ L++eN++Lk+el++l++++++l+se+
  TRIUR3_15554-P1 300 EREVKKQKRKQSNRESARRSRLRKQAEWEEVASRADLLKQENSSLKEELKQLQEKCDNLTSEN 362
                      799**********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.9E-281101IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165965.4E-13140268No hitNo description
Gene3DG3DSA:1.20.5.1706.3E-15295358No hitNo description
PfamPF001706.8E-18300362IPR004827Basic-leucine zipper domain
SMARTSM003388.5E-20300364IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.449302365IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-9303359No hitNo description
CDDcd147022.72E-21305356No hitNo description
PROSITE patternPS000360307322IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MGKGDVATRS KSQKSSTAQN EQSTPTNPRT AYPDWSQFQA YYNVPGTAQM TPPAYFHSTV  60
TPGPQGHPYM WGPQMMPPYG TPPPYTTMYA QGTPYQQAPM PPGSHPYSPY PVQAPNGTVQ  120
TPTSGAGGSE TDKSNKNKRK TPLKRSKGSL GSLDVVTVKD KTPPTKPLVS SSNEGSSQSE  180
SGSGSYSGGS STNSKSGSHT KDGSEHGPAN DASNKGVTAQ GTAVEPTQVS SGPVVLNPMM  240
PYWPVPPPMP GQATGVSMGV DYWGAPTSVP MHGKAVAAPT SAPSSNSRDI VLSDPVIQDE  300
REVKKQKRKQ SNRESARRSR LRKQAEWEEV ASRADLLKQE NSSLKEELKQ LQEKCDNLTS  360
ENTSLHEKLK ALDSEKPNGN L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1316322RRSRLRK
2316323RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankWHTHBP1AC0.0D12920.2 Triticum aestivum mRNA for transcription factor HBP-1a(c14), complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010228895.10.0PREDICTED: transcription factor HBP-1a-like
RefseqXP_010228896.10.0PREDICTED: transcription factor HBP-1a-like
RefseqXP_010228897.10.0PREDICTED: transcription factor HBP-1a-like
RefseqXP_010228898.10.0PREDICTED: transcription factor HBP-1a-like
RefseqXP_014753065.10.0PREDICTED: transcription factor HBP-1a-like
TrEMBLM8AV200.0M8AV20_TRIUA; G-box-binding factor 1
STRINGMLOC_58529.30.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115063238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-58basic region/leucine zipper transcription factor 16